Information for 6-GCCAGWGMAG (Motif 8)

A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
Reverse Opposite:
A T G C A G C T A C G T T A G C G C T A A T G C A C G T A C T G T A C G T A G C
p-value:1e-23
log p-value:-5.335e+01
Information Content per bp:1.652
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets55.8 +/- 27.7bp
Average Position of motif in Background25.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCCAGWGMAG-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGWGMAG
TGCCAA-----
 A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCAGWGMAG
CGTGCCAAG----
 A C G T A C G T A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCCAGWGMAG-
-----NGAAGC
 A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGWGMAG
ATGCCAGACN--
 A C G T A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCAGWGMAG----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCAGWGMAG
GTCCCCAGGGGA-
 A C G T A C G T A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCAGWGMAG
WDNCTGGGCA-
 A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCCAGWGMAG
ACTAGCCAATCA--
 A C G T A C G T A C G T A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCAGWGMAG
TTGCCAAG----
 A C G T A C G T A T C G A T G C T G A C G T C A T A C G C G A T A T C G T G C A T C G A T A C G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T