Information for 22-CAATTTTTMA (Motif 25)

A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A
Reverse Opposite:
A C G T C A T G T C G A G T C A T C G A C T G A T G C A G C A T A C G T A T C G
p-value:1e-13
log p-value:-3.146e+01
Information Content per bp:1.695
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.6 +/- 26.5bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CAATTTTTMA
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0070.1_Sox30_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CAATTTTTMA--
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTTTTMA
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CAATTTTTMA
CCATTGTTC-
 A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CAATTTTTMA---
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAATTTTTMA
NCCATTGTTC-
 A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTTTTMA
NNCNNAACAATTNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAATTTTTMA---
TTCTATTTTTAGNNN
 A C G T A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAATTTTTMA----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAATTTTTMA
NCCATTGTTY-
 A C G T A T G C T G C A C G T A A C G T A G C T A G C T A C G T A G C T G T A C G T C A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T