Information for 9-GGGRTGGCGC (Motif 11)

A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C
Reverse Opposite:
T C A G G T A C A C T G G A T C A G T C G C T A A G C T A G T C T A G C T G A C
p-value:1e-22
log p-value:-5.154e+01
Information Content per bp:1.574
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets48.2 +/- 27.0bp
Average Position of motif in Background59.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGRTGGCGC-
GGGGGCGGGGCC
 A C G T A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGRTGGCGC
RGKGGGCGGAGC
 A C G T A C G T A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGRTGGCGC------
NNNNTTGGCGCCGANNN
 A C G T A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGRTGGCGC
GGGGNGGGGC
 A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGRTGGCGC--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGRTGGCGC--
AGGGGGCGGGGCTG
 A C G T A C G T A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGGRTGGCGC---
-----GGCGCGCT
 A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGRTGGCGC
GGGGGCGGGGC
 A C G T A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGGRTGGCGC-
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGRTGGCGC-----
ATAAGGGCGCGCGAT
 A C T G A T C G T C A G T C G A C G A T T C A G C T A G T G A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T