Information for 5-AAATTTGAAWSAMAAA (Motif 8)

C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
Reverse Opposite:
C G A T C G A T A G C T A C G T A C G T T A C G C G A T G A C T C A G T T G A C G C T A G T C A C G T A C G A T A C G T G C A T
p-value:1e-13
log p-value:-3.049e+01
Information Content per bp:1.683
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif101.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets39.1 +/- 24.6bp
Average Position of motif in Background52.6 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAATTTGAAWSAMAAA
AAATAAGAAAAAAC--
 C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAATTTGAAWSAMAAA
GWAAYHTGABMC-----
 A C G T C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATTTGAAWSAMAAA
GWAAYHTGAKMC-----
 A C G T C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAATTTGAAWSAMAAA
--ATTTGAATT-----
 C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAATTTGAAWSAMAAA-
--ATTTGCATAACAATG
 C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A A C G T
A C G T A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAATTTGAAWSAMAAA-
--ATTTGCATAACAAAG
 C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A A C G T
A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAATTTGAAWSAMAAA------
-AAANNGAAAGTGAAAGTAAAN
 C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAATTTGAAWSAMAAA
GAAAAAATTGCAAGG----
 A C G T A C G T A C G T C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAATTTGAAWSAMAAA
TNGAATTTCATTNAN---
 A C G T A C G T C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AAATTTGAAWSAMAAA
NNTAATTAGA--------
 A C G T A C G T C G T A C G T A G C T A C G A T C A G T C G A T A C T G G C T A C T G A G C T A A T G C T G C A T G C A C T G A C G T A C G T A
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T