Information for 8-CAGGTCAGCTTTC (Motif 13)

A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C T G C G T A G T A C A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.5 +/- 13.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGGTCAGCTTTC
CACTTCCYCTTT-
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGGTCAGCTTTC
-GKVTCADRTTWC
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGGTCAGCTTTC
-GKMTCADRTTWC
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGGTCAGCTTTC
-AGGTCA------
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGTCAGCTTTC
TRAGGTCA------
 A C G T A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGTCAGCTTTC-
TACTTCCGCTTTTT
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C A C G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGTCAGCTTTC
CAGGTGAGG----
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGGTCAGCTTTC
-AGTTTCAGTTTC
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGGTCAGCTTTC
ATCAAGGTCA------
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGGTCAGCTTTC--
-AGTTTCGGTTTCGN
 A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T
A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A