Information for 1-CCACCCGAGG (Motif 11)

A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G
Reverse Opposite:
A G T C A G T C A C G T G T A C C T A G C T A G C T A G C A G T C T A G A T C G
p-value:1e-11
log p-value:-2.605e+01
Information Content per bp:1.829
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif197.4
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets52.5 +/- 24.1bp
Average Position of motif in Background52.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCACCCGAGG---
NCCCCCCCGGGGGGN
 A C G T A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCACCCGAGG---
ACCCCCCCGGGGGGN
 A C G T A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCACCCGAGG----
TCACCTCTGGGCAG
 A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCACCCGAGG---
CCCCCCCGGGGGNN
 A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCACCCGAGG----
GGCACCCAGGGGTGC
 A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACCCGAGG---
GACCCCCCGCTGTGC
 A C G T A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCGAGG-------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCACCCGAGG------
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCACCCGAGG---------
GCCASCAGGGGGCGCYVNNG
 A C G T A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCACCCGAGG----
--SCCTSAGGSCAW
 A T G C A G T C G T C A G A T C G A T C G A T C C A T G C G T A A C T G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T