Information for 12-MRAYMATWAWAAT (Motif 24)

G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C G T C G A T C G T A A C G T C A G T C T G A A C G T A G C T C A T G
p-value:1e-5
log p-value:-1.375e+01
Information Content per bp:1.809
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 13.8bp
Average Position of motif in Background48.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:MRAYMATWAWAAT----
-NANTATTATAATTNNN
 G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:MRAYMATWAWAAT----
-NNTAATTATAATNANN
 G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:MRAYMATWAWAAT----
-NNTAATTATAATTNNN
 G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:MRAYMATWAWAAT----
-TAAGATTATAATACGG
 G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-MRAYMATWAWAAT--
AGAGCCATAAAATTCG
 A C G T G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-MRAYMATWAWAAT---
ACGGCCATAAAATTAAT
 A C G T G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:MRAYMATWAWAAT
--GCAATAAAAA-
 G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T
A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MRAYMATWAWAAT
-GGTAATAAAAA-
 G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T
A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T

MNX1/MA0707.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:MRAYMATWAWAAT
-GGTAATTAAA--
 G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T
A C G T C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-MRAYMATWAWAAT--
TAGGTAATAAAATTCA
 A C G T G T A C C T G A C G T A A G C T G T C A C G T A A C G T C G T A C G T A C G A T C G T A C G T A A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A