Information for 5-AGTGGAGTCC (Motif 20)

T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C
Reverse Opposite:
C T A G A T C G G C T A T A G C G C A T A G T C A G T C T G C A A T G C A G C T
p-value:1e-6
log p-value:-1.573e+01
Information Content per bp:1.679
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif1689.9
Percentage of Background Sequences with motif3.45%
Average Position of motif in Targets46.0 +/- 26.7bp
Average Position of motif in Background50.1 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGTGGAGTCC
-GTGGAT---
 T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGTGGAGTCC---
AGGGGAATCCCCT
 T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C A C G T A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGAGTCC----
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGTGGAGTCC
TTRAGTGSYK---
 A C G T A C G T A C G T T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTGGAGTCC---
AGGGGAATCCCCT
 T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C A C G T A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGAGTCC
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTGGAGTCC---
-GGGGATTCCCCC
 T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C A C G T A C G T A C G T
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGTGGAGTCC
BTBRAGTGSN----
 A C G T A C G T A C G T A C G T T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGAGTCC
NTCAAGTGG-----
 A C G T A C G T A C G T A C G T T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTGGAGTCC-
-GTGGGCCCCA
 T C G A A T C G A C G T T C A G T C A G C G T A A T C G C G A T T A G C G A T C A C G T
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A