Information for 5-GRAGCCMMKRCMAGCC (Motif 10)

A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G A C T G G A C T T G C A A C T G A C G T A C T G A C T G A G T C A G C T A G C T A G T C
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 10.0bp
Average Position of motif in Background55.1 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GRAGCCMMKRCMAGCC--
---TCCCAGMCRAGCCCC
 A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GRAGCCMMKRCMAGCC
NGAAGC-----------
 A C G T A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GRAGCCMMKRCMAGCC
CGGAGC-----------
 A C G T A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GRAGCCMMKRCMAGCC
--GGCCACRCCCMK--
 A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:11
Orientation:forward strand
Alignment:GRAGCCMMKRCMAGCC
-----------CAGCC
 A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GRAGCCMMKRCMAGCC
-ATGCCCGGGCATGT-
 A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C
A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GRAGCCMMKRCMAGCC---
GGYAGCAYDTGCTDCCCNNN
 A C G T A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GRAGCCMMKRCMAGCC
---GCCACACCCA---
 A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GRAGCCMMKRCMAGCC----
----ACTATGCCAACCTACC
 A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:GRAGCCMMKRCMAGCC--
----------BCAGACWA
 A C T G T C G A C T G A A C T G A G T C A G T C T G C A G T A C A C G T C T G A A G T C G T A C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A