Information for 6-CAGCASCTCCTCCCWG (Motif 26)

A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A C T G A C T G C G T A A C T G A C T G C G T A A C T G T A C G A G C T A C T G A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.381e+01
Information Content per bp:1.927
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 7.4bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAGCASCTCCTCCCWG
----CNGTCCTCCC--
 A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAGCASCTCCTCCCWG
ADGGYAGYAGCATCT-----
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCASCTCCTCCCWG
CTCAGCAGCTGCTACTG-
 A C G T A C G T A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCASCTCCTCCCWG--
GGYAGCAYDTGCTDCCCNNN
 A C G T A C G T A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCASCTCCTCCCWG
-AGCAGCTGCT-----
 A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAGCASCTCCTCCCWG
---CACTTCCTCT---
 A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGCASCTCCTCCCWG-
-----GCTCCGCCCMCY
 A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAGCASCTCCTCCCWG-
---NAGCCCCGCCCCCN
 A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGCASCTCCTCCCWG
-----GCCCCGCCCC-
 A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGCASCTCCTCCCWG
SNGCACCTGCHS----
 A G T C C G T A A C T G A G T C C T G A A T G C A G T C A C G T A G T C A G T C A C G T A G T C G T A C A G T C C G T A A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T