Information for 7-TCTCAGTCTA (Motif 23)

A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
C G A T C G T A A C T G C G T A A G T C C G A T A C T G C G T A A C T G C G T A
p-value:1e-6
log p-value:-1.526e+01
Information Content per bp:1.942
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.9 +/- 29.0bp
Average Position of motif in Background51.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCTCAGTCTA
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCTCAGTCTA
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCAGTCTA
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCTCAGTCTA-
---TWGTCTGV
 A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL002.1_INR/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCTCAGTCTA
--TCAGTCTT
 A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTCAGTCTA-
---CTGTCTGG
 A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTCAGTCTA
NCTGTCAATCAN
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTCAGTCTA
SCTGTCAVTCAV
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTCAGTCTA-----
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTCAGTCTA-
-VBSYGTCTGG
 A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G