Information for 1-GACAGAGGCGCCG (Motif 1)

A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
Reverse Opposite:
A G T C A T C G A C T G A G T C A T C G A T G C A G T C A C G T A G T C A G C T A C T G A C G T A G T C
p-value:1e-13
log p-value:-3.061e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 28.6bp
Average Position of motif in Background40.0 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GACAGAGGCGCCG
AGCAACAGCCGCACC-
 A C G T A C G T A C G T A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACAGAGGCGCCG----
NNNNTTGGCGCCGANNN
 A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GACAGAGGCGCCG----
NNNNTTGGCGCCGANNN
 A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGGCGCCG
TTGACAG--------
 A C G T A C G T A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GACAGAGGCGCCG-
------GGCGCGCT
 A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGGCGCCG
TTGACAGC-------
 A C G T A C G T A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACAGAGGCGCCG
-ACAAAGGNBCCT
 A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGGCGCCG
TTGACAGG-------
 A C G T A C G T A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GACAGAGGCGCCG
AACAAAGG-----
 A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GACAGAGGCGCCG
GATATTGACAGCTGCGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C T G A A C T G G T C A A C T G A T C G A T G C A C T G A G T C A T G C A C T G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T