Information for 5-GTTGATTTAA (Motif 7)

T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A
Reverse Opposite:
G C A T A G C T C G T A C G T A C G T A A G C T A G T C G T C A C T G A A T G C
p-value:1e-17
log p-value:-3.931e+01
Information Content per bp:1.829
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.2 +/- 28.7bp
Average Position of motif in Background61.1 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GTTGATTTAA----
--TGATTTATGGCC
 T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTTGATTTAA----
-NTGATTTATGGCC
 T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTGATTTAA
CNGTGATTTN-
 A C G T T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTTGATTTAA---
--TGATTTATGGC
 T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTTGATTTAA----
--TGATTTATGGCC
 T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTTGATTTAA
NNTGTGGATTSS-
 A C G T A C G T A C G T T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTGATTTAA----
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTGATTTAA
ATTGATTYND
 T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTGATTTAA
TGTGGATTNNN
 A C G T T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTGATTTAA
-TTGATTGN-
 T A C G A G C T A C G T A C T G C T G A C G A T A C G T A C G T C T G A C G T A
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T