Information for 2-TGCAGCTTGGCTT (Motif 2)

C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T
Reverse Opposite:
G T C A C G T A A T C G A T G C T G A C T C G A T C G A T A C G T A G C C G A T A T C G G T A C G T C A
p-value:1e-35
log p-value:-8.097e+01
Information Content per bp:1.643
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets49.7 +/- 27.0bp
Average Position of motif in Background67.8 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TGCAGCTTGGCTT
------TTGGCA-
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT---
NGTAGGTTGGCATNNN
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT-
-----NTTGGCANN
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT
--CCGATTGGCT-
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT
CGCAGCTGCG---
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT
--AAGCTTG----
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGCAGCTTGGCTT-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT
-GCAGCTGTNN--
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT-
----NNTTGGCANN
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCAGCTTGGCTT
----GGTTGGCAT
 C A G T A C T G A T G C C G T A A T C G A T G C A G C T A C G T A C T G A T C G T A G C G C A T C A G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T