Information for 17-TGCCTACTGCACACTA (Motif 37)

A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C T G A C G T C T A G G T A C C T G A A C T G A C G T C G T A A C T G A C T G G T A C C G T A
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 30.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGCCTACTGCACACTA----
----CGAAGCACACAAAATA
 A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGCCTACTGCACACTA
TTTGCACACGGCAC----
 A C G T A C G T A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTACTGCACACTA
CNNNGCTACTGTANNN--
 A C G T A C G T A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGCCTACTGCACACTA---
---NNTTTGCACACGGCCC
 A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGCCTACTGCACACTA
ATGCCAACC--------
 A C G T A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTACTGCACACTA
TNNTGCTACTGTNNNN--
 A C G T A C G T A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TGCCTACTGCACACTA
ATGCATAATTCA-----
 A C G T A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TGCCTACTGCACACTA----
----AGCGGCACACACGCAA
 A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TGCCTACTGCACACTA
ATGCATWATGCATRW--
 A C G T A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TGCCTACTGCACACTA
ATGCCCACC--------
 A C G T A C G T A C T G A G T C G T A C A C G T C G T A A G T C A G C T A C T G A G T C C G T A A G T C C G T A G T A C C G A T C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T