Information for 15-GNGGAAAGGTWGTTCC (Motif 27)

A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C
Reverse Opposite:
A C T G A C T G C T G A C T G A A T G C G C T A C T G A A G T C A T G C A G C T C G A T A C G T G T A C G A T C A G T C A G T C
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.734
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 24.7bp
Average Position of motif in Background36.1 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GNGGAAAGGTWGTTCC
NAGNACANNNTGTNCT
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GNGGAAAGGTWGTTCC
-GGGAATTGTAGT---
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GNGGAAAGGTWGTTCC
TCGCGAAGGTTGTACT
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GNGGAAAGGTWGTTCC-
-AGNACAGNCTGTTCTN
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C A C G T
A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

Ar/MA0007.3/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GNGGAAAGGTWGTTCC-
GGGAACACGGTGTACCC
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GNGGAAAGGTWGTTCC---
---AANTTATTGTTCTNNA
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GNGGAAAGGTWGTTCC-
GGGAACACAATGTTCCC
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GNGGAAAGGTWGTTCC-
--GRACAGWMTGTYCTB
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C A C G T
A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GNGGAAAGGTWGTTCC-
--GVACAGNMTGTYCTB
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C A C G T
A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GNGGAAAGGTWGTTCC-
GGGTACATAATGTTCCC
 A C T G A C T G C A T G A C T G G T C A C G T A C T G A A T C G C T A G A G C T C G A T A T C G A G C T A G C T A G T C G T A C A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C