Information for 2-ATAGTBWYSAAATAGW (Motif 2)

C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
Reverse Opposite:
C G T A G A T C G C A T C T G A A C G T C G A T C A G T T A C G C T G A G C A T T G A C C G T A T A G C G C A T C T G A G C A T
p-value:1e-15
log p-value:-3.571e+01
Information Content per bp:1.626
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets39.2 +/- 25.0bp
Average Position of motif in Background53.5 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATAGTBWYSAAATAGW----
NTAATTDGCYAATTANNWWD
 C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T A C G T A C G T A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATAGTBWYSAAATAGW
ACTAGTTAAC-------
 A C G T C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATAGTBWYSAAATAGW
CCATTGTATGCAAAT---
 A C G T A C G T C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:ATAGTBWYSAAATAGW
----TTATGCAAT---
 C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
A C G T A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ATAGTBWYSAAATAGW
--NATTGTGCAAT---
 C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:ATAGTBWYSAAATAGW
-AAGTCAGCANTTTTN
 C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATAGTBWYSAAATAGW
CTGAGTCAGCAATTT--
 A C G T C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATAGTBWYSAAATAGW
NCTANGTCAGCAAATTT-
 A C G T A C G T C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ATAGTBWYSAAATAGW
---ATGATGCAAT---
 C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:ATAGTBWYSAAATAGW
---MTGATGCAAT---
 C G T A A G C T C G T A A T C G C G A T A C T G C G T A G A C T A T G C G C T A C G T A G T C A A G C T C G T A C T A G C G A T
A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T