Information for 11-TTTHACATTCATAAGG (Motif 19)

G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
Reverse Opposite:
G T A C T G A C A G C T G A C T C T G A A C G T T A C G G C T A C T G A C G A T A C T G A G C T C A G T G T C A C G T A C G T A
p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.663
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets64.9 +/- 13.5bp
Average Position of motif in Background45.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTHACATTCATAAGG-
GACCACATTCATACAAT
 G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTTHACATTCATAAGG--
----ACATTCATGACACG
 G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTTHACATTCATAAGG
ATGAATATTCATGAG-
 G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTHACATTCATAAGG
BTVATTWGCATA-------
 A C G T A C G T A C G T G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTHACATTCATAAGG
NNCATTCATTCATNNN-
 A C G T G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTHACATTCATAAGG
ATTTGCATACAATGG-
 G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTHACATTCATAAGG
AYATGYATATGCATR---
 A C G T A C G T G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTHACATTCATAAGG
ATTTGCATA-------
 G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTHACATTCATAAGG
---CACATTCCAT---
 G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTHACATTCATAAGG
---CACATTCCAT---
 G C A T C G A T C A G T G T A C C T G A A G T C C G T A A G C T C G A T A G T C C G T A G A C T C T G A T C G A A C T G A C T G
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T