Information for 6-CTGGCCAGTGCCG (Motif 13)

A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
Reverse Opposite:
A G T C A T C G A C T G A G T C G T C A A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 18.8bp
Average Position of motif in Background45.2 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTGGCCAGTGCCG
-TGGCACGTGCCA
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGGCCAGTGCCG
-TGGCACGTGCCG
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGGCCAGTGCCG
--GACACGTGCC-
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGCCAGTGCCG
--GGCACGTGTC-
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGGCCAGTGCCG
CTGACCTTTG---
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGGCCAGTGCCG
-SDGCAGGTGCNS
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGGCCAGTGCCG--
-TGACCTTTGCCCTA
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

BHLHE40/MA0464.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGGCCAGTGCCG
--GTCACGTGAN-
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCAGTGCCG
NTTGGCANN-----
 A C G T A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGGCCAGTGCCG
TTGGCA-------
 A G T C A C G T A C T G T C A G A G T C G T A C T C G A A T C G A C G T A C T G G T A C A T G C A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T