Information for 4-CGCACTGATTGCA (Motif 11)

A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
Reverse Opposite:
G C A T C A T G A G T C G T C A C G T A C G A T G A T C C G T A A T C G A C G T A C T G A T G C T A C G
p-value:1e-11
log p-value:-2.712e+01
Information Content per bp:1.724
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.0 +/- 27.6bp
Average Position of motif in Background52.3 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGCACTGATTGCA
-GCAGTGATTT--
 A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGCACTGATTGCA
----TTGATTGN-
 A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CGCACTGATTGCA
----CTAATKGV-
 A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCACTGATTGCA
ACCACTTAA----
 A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCACTGATTGCA
ACCACTTAA----
 A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCACTGATTGCA
-GCACTTAA----
 A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGCACTGATTGCA
NNNNTGCCAGTGATTG--
 A C G T A C G T A C G T A C G T A C G T A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCACTGATTGCA
RGGGCACTAACY---
 A C G T A C G T A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCACTGATTGCA---
ANNCATTAATTGCTNGN
 A C G T A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCACTGATTGCA---
ANNCATTAATTGCTNGN
 A C G T A T G C T A C G G T A C C G T A A T G C A C G T C T A G C G T A C G A T A C G T A C T G G T A C C G T A A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T