Information for 5-TGGCTGCTGGVAGTCG (Motif 8)

A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
Reverse Opposite:
A G T C A C T G C G T A A T G C G A C T A T C G A G T C G T A C G C T A T A C G G T A C G C T A C T A G A G T C A T G C T C G A
p-value:1e-13
log p-value:-3.027e+01
Information Content per bp:1.714
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets42.5 +/- 22.2bp
Average Position of motif in Background41.4 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
NCGCAGCGGGGGGTC-
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
RGSMTBCTGGGAAAT-
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
NCNCAGCGGGGGGTC-
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
----TNNGGGCAG---
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
-CACAGCGGGGGGTC-
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
-CTTCGCGGGGGGTC-
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG-----
-GCMTBCTGGGAGTTGTAGTY
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
-KGTTGCTAGGMAACA
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG---
---NTNTGGGGGGTCNNNA
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGCTGCTGGVAGTCG
DCHCAGCAGGRGGCC-
 A C G T A T C G A C T G G A T C C A G T A C T G A T G C C G A T A C T G A C T G T A C G C G T A A T C G C G A T A G T C T C A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T