Information for 18-CGCAGACGCAGGA (Motif 20)

G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
Reverse Opposite:
A G C T A G T C A T G C A C G T A T C G A G T C A C T G A G C T A G T C A G C T A T C G G T A C A C T G
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.762
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif60.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets56.1 +/- 28.1bp
Average Position of motif in Background47.9 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGACGCAGGA
GCGCATGCGCAG--
 A C G T G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGCAGACGCAGGA
-CCAGACRSVB--
 G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGACGCAGGA
TGCGCAGGCGC----
 A C G T A C G T G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGACGCAGGA
NCGCGGACGTTG--
 A C G T G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGACGCAGGA-
NCGCAGCGGGGGGTC
 A C G T G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGCAGACGCAGGA
-CCAGACAG----
 G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGACGCAGGA
GCGCATGCGCAC--
 A C G T G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGCAGACGCAGGA
CACAGCAGGGGG-
 G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGACGCAGGA-
DCHCAGCAGGRGGCC
 A C G T G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGCAGACGCAGGA-
CACAGCGGGGGGTC
 G T A C A C T G A T G C C T G A A C T G T C G A T G A C C T A G A T G C T G C A A T C G A C T G T C G A A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C