Information for 10-GGCGGGACTT (Motif 13)

A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
Reverse Opposite:
C G T A C G T A A T C G A C G T A T G C A G T C A G T C A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.908
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif106.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets55.0 +/- 30.3bp
Average Position of motif in Background49.6 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGCGGGACTT
BTKGGCGGGAAA-
 A C G T A C G T A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGACTT
CWGGCGGGAA--
 A C G T A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGGACTT
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGACTT-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGACTT
GGGCGGGACC-
 A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGCGGGACTT
GGCGGGAAAH
 A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGCGGGACTT
GGCGGGAARN
 A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGACTT
GGGCGGGAAGG
 A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGCGGGACTT
AGGGGGCGGGGCTG
 A C G T A C G T A C G T A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGACTT
GGGCGGGAAGG
 A C G T A C T G C T A G G T A C A C T G A C T G A T C G C G T A A T G C A C G T C G A T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G