Information for 9-CTCCAATCCCCACATC (Motif 18)

A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
Reverse Opposite:
C T A G G T C A C G A T A T C G A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C T G
p-value:1e-6
log p-value:-1.476e+01
Information Content per bp:1.920
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 14.2bp
Average Position of motif in Background53.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTCCAATCCCCACATC
ACTACAATTCCC-----
 A C G T A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCCAATCCCCACATC
-TCCAATCCACA----
 A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCCAATCCCCACATC
--SSAATCCACANN--
 A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTCCAATCCCCACATC
------TCCCCA----
 A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCAATCCCCACATC
AGATGCAATCCC------
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCCAATCCCCACATC
GNNAGCTAATCCCCCN---
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAATCCCCACATC
AGGCTAATCCCCAANG-
 A C G T A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCCAATCCCCACATC-
--CTTATCTCHMCATCT
 A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C A C G T
A C G T A C G T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CTCCAATCCCCACATC----
--------ACCACATCCTGT
 A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCCAATCCCCACATC
--CTAATCCTCTT---
 A G T C A C G T A G T C A G T C C G T A G T C A A C G T A G T C A G T C G T A C A G T C C G T A T A G C G C T A A C G T A G T C
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T