p-value: | 1e-9 |
log p-value: | -2.211e+01 |
Information Content per bp: | 1.758 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.01% |
Number of Background Sequences with motif | 20.0 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 46.9 +/- 25.3bp |
Average Position of motif in Background | 47.3 +/- 33.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAGCCAGGCAGGARC SCAGYCADGCATGAC- |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGAGCCAGGCAGGARC GCAGCCAAGCGTGACN |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGAGCCAGGCAGGARC -----AAGGCAAGTGT |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGAGCCAGGCAGGARC AGGTGNCAGACAG---- |
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PAX5/MA0014.2/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGAGCCAGGCAGGARC GAGGGCAGCCAAGCGTGAC- |
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E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGAGCCAGGCAGGARC -----CWGGCGGGAA- |
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EWSR1-FLI1/MA0149.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGAGCCAGGCAGGARC- GGAAGGAAGGAAGGAAGG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGAGCCAGGCAGGARC CAAATCCAGACATCACA |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGAGCCAGGCAGGARC ----CCAGACAG---- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGAGCCAGGCAGGARC-- ---DCHCAGCAGGRGGCC |
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