Information for 12-GGGTGAGCGWCCTCRG (Motif 24)

A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
Reverse Opposite:
A G T C A G C T A C T G C G T A A C T G A C T G C G A T A G T C A T C G A G T C A C G T A G T C C G T A A G T C A G T C A G T C
p-value:1e-1
log p-value:-3.998e+00
Information Content per bp:1.911
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 30.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGTGAGCGWCCTCRG
AGGTCANTGACCTN--
 A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGTGAGCGWCCTCRG
-GGTTAGAGACCT---
 A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGTGAGCGWCCTCRG
-RGTTAGTGCCCY---
 A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGGTGAGCGWCCTCRG
GTGGGGTGAT---------
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGGTGAGCGWCCTCRG
NTGGGTGTGGCC------
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGGTGAGCGWCCTCRG
CAGGTAAGTAT------
 A C G T A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGAGCGWCCTCRG
TGGGTGTGGCN------
 A C G T A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGGTGAGCGWCCTCRG
GTGGCGTGACNG-------
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GGGTGAGCGWCCTCRG
ATGGGGTGAT---------
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGGTGAGCGWCCTCRG
----CAACGTCCGCGG
 A C T G A C T G A C T G A C G T A C T G C G T A A C T G A T G C C T A G C G A T A G T C A G T C A C G T A G T C C T A G A C T G
A C G T A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G