Information for 9-GACACTGGGCCTG (Motif 20)

C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G A C G T A G T C
p-value:1e-6
log p-value:-1.491e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.0 +/- 23.3bp
Average Position of motif in Background29.3 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GACACTGGGCCTG
----CTAGGCCT-
 C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GACACTGGGCCTG
-WDNCTGGGCA--
 C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GACACTGGGCCTG-
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACACTGGGCCTG
GGGGCCGAGGCCTG
 A C G T C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GACACTGGGCCTG
----CNAGGCCT-
 C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GACACTGGGCCTG-
----CTGTTCCTGG
 C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GACACTGGGCCTG
GTAGGTCACTGGGTCA-
 A C G T A C G T A C G T A C G T C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACACTGGGCCTG
GAACAATGGN----
 A C G T C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GACACTGGGCCTG
AACAAAGG-----
 C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GACACTGGGCCTG
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T C T A G C G T A A G T C T C G A A G T C A C G T A C T G A C T G A T C G A G T C A G T C C G A T A C T G
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A