Information for 1-CGGGGGGTCC (Motif 2)

A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C
Reverse Opposite:
C T A G T C A G T G C A A G T C G T A C A G T C A T G C T A G C A G T C T A C G
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.828
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif231.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets53.2 +/- 23.2bp
Average Position of motif in Background50.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CGGGGGGTCC---
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

GLIS2/MA0736.1/Jaspar

Match Rank:2
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGGTCC
CTTCGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------CGGGGGGTCC
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------CGGGGGGTCC
NCGCAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CGGGGGGTCC-----
GCTGGGGGGTACCCCTT
 A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGGTCC
CACAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGGTCC--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGGGGGGTCC
CGTGGGTGGTCC
 A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

GLIS3/MA0737.1/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGGTCC
CTTCGTGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGGGGGTCC-
-NRRGGGTCTT
 A T G C A C T G A T C G A T C G T C A G A C T G C T A G A C G T A G T C A G T C A C G T
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T