Information for 4-CAGAGCTGAGGATATT (Motif 9)

A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A A G C T A G T C G T A C A G C T A G T C C G T A A T C G A G T C C G A T A G T C A C G T C T A G
p-value:1e-12
log p-value:-2.941e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 29.0bp
Average Position of motif in Background54.1 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CAGAGCTGAGGATATT--
-------AAGGATATNTN
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAGAGCTGAGGATATT
-----NACAGGAAAT-
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CAGAGCTGAGGATATT
------AGAGGAA---
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CAGAGCTGAGGATATT-
------TGATTAAATTA
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

JUN/MA0488.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAGAGCTGAGGATATT
--AAGATGATGTCAT-
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T
A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CAGAGCTGAGGATATT
-----ATGATGCAAT-
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CAGAGCTGAGGATATT-
-----NDCAGGAARTNN
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CAGAGCTGAGGATATT
------AGAGGAAGTG
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

DUXA/MA0884.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CAGAGCTGAGGATATT--
-----NTGATTAAATTAN
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CAGAGCTGAGGATATT
-----MTGATGCAAT-
 A G T C C G T A C T A G C G T A C T A G A T G C G C A T A C T G C T G A A C T G C T A G C T G A G C A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T