Information for 1-AAAGTTTGGT (Motif 8)

T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T
Reverse Opposite:
G T C A G T A C G T A C G C T A T C G A T C G A G A T C A G C T G A C T A G C T
p-value:1e-12
log p-value:-2.945e+01
Information Content per bp:1.605
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif9.62%
Number of Background Sequences with motif1840.1
Percentage of Background Sequences with motif3.82%
Average Position of motif in Targets49.5 +/- 25.9bp
Average Position of motif in Background48.9 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAGTTTGGT
-AAGCTTG--
 T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAGTTTGGT---
-NNHTGTGGTTWN
 T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

POL007.1_BREd/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAAGTTTGGT
---GTTTGTT
 T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T
A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTTGGT--
TCGCGAAGGTTGTACT
 A C G T A C G T A C G T A C G T T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTTGGT-
GAATGTTTGTTT
 A C G T T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTTGGT----
TGGACTTTGNNCTCN
 A C G T T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAAGTTTGGT---
---CTGTGGTTTN
 T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTTGGT---
AAAATTGTTATGAA
 A C G T T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAAGTTTGGT------
NNNNTTTGTTTACNNT
 T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTTGGT
TATTGTTTATT
 A C G T T C G A C T G A T C G A C T A G A G C T A G C T C G A T C A T G C A T G C A G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T