Information for 8-CTGGGGCACG (Motif 25)

A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A G T C A G T C A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-9.699e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.2 +/- 35.8bp
Average Position of motif in Background47.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCACG---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGGGGCACG
NGTGGGCAT-
 A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGGGGCACG--
----BGCACGTA
 A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTGGGGCACG---
-----GCACGTAY
 A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTGGGGCACG---
-----GCACGTNC
 A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTGGGGCACG----
----GGCACGCGTC
 A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTGGGGCACG--
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGGGGCACG-
-TGGGGCCCAC
 A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T
A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGGCACG
GCTCGGSCTC-
 A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGGGGCACG----
----GGCACGTGTC
 A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C