Information for 6-CTCCTAGTGC (Motif 8)

G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C
Reverse Opposite:
A T C G A G T C C G T A A G T C C G A T C G T A C T A G C T A G C G T A C A T G
p-value:1e-9
log p-value:-2.254e+01
Information Content per bp:1.852
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif79.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets47.2 +/- 27.2bp
Average Position of motif in Background51.4 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CTCCTAGTGC
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCCTAGTGC--
--TTRAGTGSYK
 G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCTAGTGC-------
CGAACAGTGCTCACTAT
 G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCCTAGTGC
-NTCAAGTGG
 G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCCTAGTGC-
-NTCAAGTGGN
 G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTAGTGC---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCCTAGTGC--
--TTAAGTGCTT
 G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAGTGC-
GRTGMTRGAGCC
 A C G T G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CTCCTAGTGC---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCCTAGTGC--
--CCATGTGCTT
 G T A C A C G T A G T C A G T C G C A T C G T A C T A G A C G T C T A G A T G C A C G T A C G T
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T