Information for 22-ATCCCTGCTTGCC (Motif 42)

G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G G T A C G T C A C G T A A C T G A G T C C G T A A C T G A C T G A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.090e+01
Information Content per bp:1.922
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.5 +/- 0.5bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCCCTGCTTGCC
CCCCCTGCTGTG-
 G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCCCTGCTTGCC
AAATCACTGC-----
 A C G T A C G T G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATCCCTGCTTGCC--
----NNACTTGCCTT
 G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCCCTGCTTGCC
GGCCYCCTGCTGDGH
 A C G T A C G T G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATCCCTGCTTGCC
----CTGTTTAC-
 G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATCCCTGCTTGCC
ATTTCCCAGVAKSCY
 A C G T A C G T G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATCCCTGCTTGCC
AAATCACAGCA----
 A C G T A C G T G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATCCCTGCTTGCC--
TCNCCTGCTGNGNNN
 G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ATCCCTGCTTGCC
---CCTGCTGAGH
 G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ATCCCTGCTTGCC-
----TTGCGTGCVA
 G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A