Information for 2-GGATCHTGCTGTCCCT (Motif 2)

A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T
Reverse Opposite:
C G T A A T C G A C T G A C T G C G T A G T A C C G T A A C T G A G T C C T G A C G T A C T A G C T G A A C G T T A G C A G T C
p-value:1e-13
log p-value:-3.033e+01
Information Content per bp:1.793
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 28.0bp
Average Position of motif in Background61.3 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GGATCHTGCTGTCCCT---
-------ACTTTCACTTTC
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGATCHTGCTGTCCCT----
-----TCACTTTCACTTTCN
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GGATCHTGCTGTCCCT--
--------CTGTTCCTGG
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGATCHTGCTGTCCCT
AGNACAGNCTGTTCTN
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGATCHTGCTGTCCCT
GTTTTGCTTTCACTTTCC--
 A C G T A C G T A C G T A C G T A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GGATCHTGCTGTCCCT---
-------NCTGTCAATCAN
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GGATCHTGCTGTCCCT
-------GCTGTG---
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGATCHTGCTGTCCCT
GGCCYCCTGCTGDGH--
 A C G T A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GGATCHTGCTGTCCCT-
-------ATTTTCCATT
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GGATCHTGCTGTCCCT-
-------ATTTTCCATT
 A C T G A T C G G T C A A G C T A G T C G A C T A G C T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T