Information for 6-CTAGCATTTTGAT (Motif 6)

T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C T G A C G T A C T G A A C G T A C T G A T G C G A C T C G T A A T C G
p-value:1e-13
log p-value:-3.224e+01
Information Content per bp:1.787
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.3 +/- 24.7bp
Average Position of motif in Background55.8 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:CTAGCATTTTGAT
-------TTTAAT
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTAGCATTTTGAT-----
-NNTTCCTTTGATCTANA
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTAGCATTTTGAT----
-TAAGATTATAATACGG
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTAGCATTTTGAT-----
-ATTTCCTTTGATCTATA
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTAGCATTTTGAT-----
-AATCCCTTTGATCTATC
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTAGCATTTTGAT----
-TATAATTATAATATTC
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTAGCATTTTGAT
GCNGCCATCTTG--
 A C G T T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTAGCATTTTGAT-----
-NNTTCCTTTGATCTNNA
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTAGCATTTTGAT---
-----ATATTAATTAA
 T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAGCATTTTGAT-
CCTTGCAATTTTTNN
 A C G T T A G C C G A T C G T A A T C G G T A C G T C A A G C T C G A T A G C T A C G T C T A G G T C A A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C