Information for 2-ATTTTACGAC (Motif 8)

C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C T G A C G T C T G A C G T A C T G A C G T A A C G T
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.7 +/- 30.2bp
Average Position of motif in Background37.1 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTACGAC----
NNNATTTTACGACNNTN
 A C G T A C G T A C G T C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTACGAC----
ANNATTTTACGACNTNA
 A C G T A C G T A C G T C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:ATTTTACGAC-
NTTTTACGACC
 C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:ATTTTACGAC-
NTTTTACGACC
 C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTACGAC----
NNNTTTTACGACNTTN
 A C G T A C G T C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:ATTTTACGAC
NTTTTACGAC
 C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTACGAC----
ANNTTTTACGACNTNN
 A C G T A C G T C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:ATTTTACGAC-
NTTTTACGACT
 C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTACGAC----
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTACGAC-
ANTTTTACGACC
 A C G T C G T A A C G T A G C T C G A T A G C T C G T A A G T C A C T G G T C A A G T C A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C