Information for 5-TCCACVTGTCTTTCCC (Motif 7)

A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C G T A C G T A A C T G C T G A G T A C C G T A A C G T C T A G A C G T A C T G A C T G G T C A
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.856
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.4 +/- 27.5bp
Average Position of motif in Background41.0 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCACVTGTCTTTCCC
-GCACGTGTCNNNN--
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC
KCCACGTGAC------
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC
GCCACGTG--------
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC
-CCATGTGCTT-----
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC
GGCACGTGTC------
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC
GCCACGTGT-------
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC
ACCATATGTT------
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC---
---------HTTTCCCASG
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCCACVTGTCTTTCCC
-CCACGTGGNN-----
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCCACVTGTCTTTCCC
GCCATCTGTT------
 A C G T A G T C A G T C C G T A A G T C T A C G A C G T A C T G A G C T A G T C A C G T A C G T A C G T G T A C A G T C A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T