Information for 4-TGTTTRTTTR (Motif 3)

C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
Reverse Opposite:
G A T C T G C A G C T A T G C A G A T C C G T A T G C A C G T A A T G C G C T A
p-value:1e-16
log p-value:-3.797e+01
Information Content per bp:1.517
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif7.78%
Number of Background Sequences with motif1091.5
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets51.0 +/- 26.2bp
Average Position of motif in Background49.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TGTTTRTTTR
GAATGTTTGTTT-
 A C G T A C G T A C G T C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGTTTRTTTR
TGTTTATTT-
 C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGTTTRTTTR
TGTTTACTTT
 C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGTTTRTTTR
TGTTTACTTT
 C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRTTTR
TTTGTTTACTTA
 A C G T A C G T C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRTTTR----
NNNNTTTGTTTACNNT
 A C G T A C G T C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTTTRTTTR
TRTTTACTTW
 C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTRTTTR------
NNNTTTGTTTACNTTNN
 A C G T C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTRTTTR------
NNNTTTGTTTACNTTNN
 A C G T C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRTTTR
TNTGTTTACTT-
 A C G T A C G T C G A T T A C G G C A T A C G T G C A T C T A G A C G T C G A T A C G T C T A G
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T