Information for 15-GGSMSAGYAGGSASAG (Motif 22)

A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A C G T A T G C A G T C A G T C A G C T T C G A A G T C A C G T A T C G A C G T A T C G A G T C A G T C
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.6 +/- 23.6bp
Average Position of motif in Background15.3 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGSMSAGYAGGSASAG
--CACAGCAGGGGG--
 A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GGSMSAGYAGGSASAG
------CCAGGAACAG
 A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGSMSAGYAGGSASAG
GAGCACAGCAGGACA--
 A C G T A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGSMSAGYAGGSASAG
-DCTCAGCAGG-----
 A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGSMSAGYAGGSASAG
-DCHCAGCAGGRGGCC
 A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGSMSAGYAGGSASAG
CCACACAGCAGGAGA--
 A C G T A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGSMSAGYAGGSASAG
CCACACAGCAGGAGA--
 A C G T A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGSMSAGYAGGSASAG
AAGGKGRCGCAGGCA---
 A C G T A C G T A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGSMSAGYAGGSASAG
TGGAACAGMA-------
 A C G T A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GGSMSAGYAGGSASAG
GGTCANYTGAGGWCA-
 A C T G A C T G A T G C G T C A A T G C C G T A A C T G A G C T C T G A A C T G A C T G A T C G C G T A A T G C C G T A A C T G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T