Information for 3-GGTGTCACCCAGGCGG (Motif 4)

A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
Reverse Opposite:
A G T C G T A C C T A G A T G C A T G C C G A T A C T G C T A G A C T G C G A T A C T G C T G A A G T C G T C A A T G C A G T C
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 19.6bp
Average Position of motif in Background51.9 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGTGTCACCCAGGCGG-
---GTCACGCTCNCTGA
 A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G A C G T
A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTGTCACCCAGGCGG
SCTGTCAVTCAV----
 A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTGTCACCCAGGCGG
NCTGTCAATCAN----
 A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTGTCACCCAGGCGG
-GGACCACCCACG---
 A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCACCCAGGCGG
GSCTGTCACTCA-----
 A C G T A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCACCCAGGCGG
VGCTGWCAVB-------
 A C G T A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGTGTCACCCAGGCGG
-----CRCCCACGCA-
 A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTGTCACCCAGGCGG
GCTGTTACCCT-----
 A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTGTCACCCAGGCGG
---YCCGCCCACGCN-
 A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCACCCAGGCGG
AGGTGTCA---------
 A C G T A C T G A T C G A C G T A C T G A G C T A G T C C G T A A G T C A G T C G T A C C G T A A T C G A T C G A G T C A C T G C T A G
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T