Information for 3-GGAAGAAGGG (Motif 6)

C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
Reverse Opposite:
T G A C A T G C G T A C C G A T A G C T A G T C C A G T C G A T G T A C G T A C
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.836
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif313.3
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets54.2 +/- 26.8bp
Average Position of motif in Background49.6 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:1
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------GGAAGAAGGG
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGAAGAAGGG-----
-GGAGAAAGGTGCGA
 C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGAAGAAGGG---
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAAGAAGGG
NGAAGC----
 C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGAAGAAGGG
ACCGGAAG-----
 A C G T A C G T A C G T C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAAGAAGGG
GGAACAAAGR
 C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

ELF5/MA0136.2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGAAGAAGGG
ACCCGGAAGTA---
 A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGAAGAAGGG
NDCAGGAARTNN--
 A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAAGAAGGG
TGGAAAA----
 A C G T C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAAGAAGGG-
-GAACAATGGN
 C A T G A C T G C G T A G T C A C T A G C T G A C G T A C A T G A T C G A C T G A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G