Information for 11-GCATAAAYTG (Motif 28)

A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G
Reverse Opposite:
A G T C C T G A T C A G A C G T A C G T A G C T C G T A A G C T A C T G G T A C
p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.742
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif111.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets48.7 +/- 25.7bp
Average Position of motif in Background49.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCATAAAYTG-------
GGAAAAATTGTTAGGAA
 A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCATAAAYTG-----
GAAAAAATTGCAAGG
 A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCATAAAYTG---
---NHAACBGYYV
 A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCATAAAYTG
NGYCATAAAWCH
 A C G T A C G T A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

Hmx1/MA0896.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCATAAAYTG-----
ANNCATTAATTGCTNGN
 A C G T A C G T A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCATAAAYTG-----
ANNCATTAATTGCTNGN
 A C G T A C G T A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCATAAAYTG
--GTAAACA-
 A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G
A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCATAAAYTG---
-----AACCGANA
 A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCATAAAYTG
GTCATAAAAN-
 A C G T A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCATAAAYTG-------
---AAAATTGTTATGAA
 A C T G T G A C C T G A C G A T C T G A G T C A C G T A A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A