Information for 13-AACCATGGGAGCA (Motif 27)

C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A G T C A G T C A G T C C G T A A C G T A C T G A C T G A C G T A C G T
p-value:1e-6
log p-value:-1.481e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.7 +/- 12.1bp
Average Position of motif in Background46.1 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:AACCATGGGAGCA---
------GGGAGGACNG
 C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AACCATGGGAGCA
------CGGAGC-
 C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACCATGGGAGCA
GAACAATGGN----
 A C G T C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACCATGGGAGCA
GAACAATGG-----
 A C G T C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AACCATGGGAGCA
VRAACAATGG-----
 A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AACCATGGGAGCA
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACCATGGGAGCA
AACAAAGG-----
 C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AACCATGGGAGCA
TTGCCATGGCAACN
 A C G T C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AACCATGGGAGCA
TTGCCATGGCAACC
 A C G T C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AACCATGGGAGCA
---CSTGGGAAAD
 C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A