Information for 6-GCCTDTGGCCTCCCBA (Motif 11)

A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
Reverse Opposite:
A C G T T A G C C A T G A T C G A T C G C G T A A C T G A C T G A T G C A G T C G T C A G A C T C T G A A C T G C T A G A T G C
p-value:1e-10
log p-value:-2.303e+01
Information Content per bp:1.738
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 20.7bp
Average Position of motif in Background47.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCTDTGGCCTCCCBA
GGGGCCGAGGCCTG----
 A C G T A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTDTGGCCTCCCBA
NGCCTNAGGCN------
 A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTDTGGCCTCCCBA
CGCCTCAGGCA------
 A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTDTGGCCTCCCBA
TGACCTTTGCCCTA----
 A C G T A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTDTGGCCTCCCBA
CCCCCTTGGGCCCC----
 A C G T A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTDTGGCCTCCCBA
TGCCTGAGGCN------
 A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTDTGGCCTCCCBA
TGACCTTTGCCCTAN---
 A C G T A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCTDTGGCCTCCCBA
TGACCTTTGACCTC----
 A C G T A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCTDTGGCCTCCCBA
TGACCTCTGACCCCN---
 A C G T A C G T A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCCTDTGGCCTCCCBA----
----ATCCCCGCCCCTAAAA
 A T C G G A T C A G T C A G C T C G T A A C G T T A C G A T C G A G T C G T A C A C G T A T G C A T G C G T A C A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A