Information for 3-CACCGSCTTCCTAAGC (Motif 3)

A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C
Reverse Opposite:
T A C G G T A C A C G T A C G T C T G A C T A G A T C G C G T A C T G A C A T G A T C G T A G C A C T G A C T G C G A T A C T G
p-value:1e-12
log p-value:-2.940e+01
Information Content per bp:1.756
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 23.2bp
Average Position of motif in Background52.2 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACCGSCTTCCTAAGC
CAGCTGTTTCCT----
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.52
Offset:9
Orientation:forward strand
Alignment:CACCGSCTTCCTAAGC-
---------GCTAATCC
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:3
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CACCGSCTTCCTAAGC
ANTTMRCASBNNNGTGYKAAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CACCGSCTTCCTAAGC--
--CCGTCTTCCCCCTCAC
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CACCGSCTTCCTAAGC---
---------GCTAATCCCC
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CACCGSCTTCCTAAGC---
---------CCTAATCCGC
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:CACCGSCTTCCTAAGC--
----------YTAATCCY
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CACCGSCTTCCTAAGC--
---------CTTAATCCC
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:forward strand
Alignment:CACCGSCTTCCTAAGC--
----------TTAATCCG
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CACCGSCTTCCTAAGC---
---------NYTAATCCYB
 A G T C C G T A A G T C G T A C A T C G T A G C G T A C A G C T A C G T A T G C A G T C A G C T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T