Information for 2-GGCGCTGTCT (Motif 9)

C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
Reverse Opposite:
C T G A T C A G T C G A G T A C C T G A A T C G G A T C C A T G T G A C G A T C
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.583
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif351.5
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets53.2 +/- 27.6bp
Average Position of motif in Background51.6 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGCGCTGTCT
---GCTGTG-
 C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGCGCTGTCT
--NGCTN---
 C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCGCTGTCT
NNAGCAGCTGCT-
 A C G T A C G T A C G T C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCTGTCT
NNGCAGCTGTT-
 A C G T A C G T C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCTGTCT
NNGCAGCTGTC-
 A C G T A C G T C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCGCTGTCT--
TGCAGCTGTCCCT
 A C G T C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCGCTGTCT
-CAGCTGTT-
 C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCTGTCT-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCTGTCT
AGCAGCTGCT-
 A C G T C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCGCTGTCT----------
GGAGCTGTCCATGGTGCTGA
 C T A G A C T G G T A C C T A G A T G C A G C T C A T G A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A