Information for 1-GCACTGCCCT (Motif 7)

C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G C T A G A T C G A G T C C G T A A C T G G A C T A T C G G A T C
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.844
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.56%
Number of Background Sequences with motif175.0
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets46.9 +/- 24.2bp
Average Position of motif in Background50.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GCACTGCCCT---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCACTGCCCT--
---CTGCCCGCA
 C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCACTGCCCT---
---CTGACCTTTG
 C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCACTGCCCT--
----TGACCTYA
 C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCACTGCCCT
NAGGTCANTGACCT
 A C G T A C G T A C G T A C G T C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCACTGCCCT-----
GGGTGTGCCCAAAAGG
 A C G T C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCACTGCCCT--
NNGCNCTGCGCGGC
 A C G T A C G T C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCACTGCCCT-
---GTGACCTT
 C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCACTGCCCT--
NAGCCCCGCCCCCN
 A C G T A C G T C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCACTGCCCT-
NNACTTGCCTT
 C T A G T A G C C T G A A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T