Information for 5-GBATGCACTGTTCTGG (Motif 9)

C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A A C T G C G T A C G T A A G T C C G T A A C T G A G C T C T A G A G T C G T C A C G A T T A C G G A T C
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.803
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 14.5bp
Average Position of motif in Background72.5 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GBATGCACTGTTCTGG-
-------CTGTTCCTGG
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GBATGCACTGTTCTGG----
---NNCTTTGTTTTGNTNNN
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GBATGCACTGTTCTGG---
---------GGTCTGGCAT
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GBATGCACTGTTCTGG
--NNGTANTGTTTTNC
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G
A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GBATGCACTGTTCTGG-
GTATCTATTGTTCTTTA
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GBATGCACTGTTCTGG
CCTTGCAATTTTTNN-
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GBATGCACTGTTCTGG---
----GTNTTGTTGTGANNT
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GBATGCACTGTTCTGG-
-------CTATTTTTGG
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GBATGCACTGTTCTGG----
-----BCNGGTTCTAGANCN
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GBATGCACTGTTCTGG-
--ATGAATWATTCATGA
 C T A G A G T C C G T A A C G T A C T G A G T C C T G A G T A C A C G T C T A G A C G T A C G T A G T C C G A T A C T G A C T G A C G T
A C G T A C G T G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A