Information for 4-CTGCATGGCYCCAGAA (Motif 6)

A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A
Reverse Opposite:
A C G T A C G T G A T C A C G T C T A G C A T G C T G A A C T G A G T C G A T C C G T A C A G T C T A G G T A C G C T A A T C G
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.711
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.1 +/- 19.1bp
Average Position of motif in Background53.3 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTGCATGGCYCCAGAA--
------GGCTCYAKCAYC
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGCATGGCYCCAGAA--
-AGCTCGGCGCCAAAAGC
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A A C G T A C G T
A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGCATGGCYCCAGAA
--SCCTAGCAACAG--
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGCATGGCYCCAGAA--
-CCTTCGGCGCCAAAAGG
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTGCATGGCYCCAGAA
---TTTGGCGCCAAA-
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A
A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CTGCATGGCYCCAGAA
-----TTGCAACATN-
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CTGCATGGCYCCAGAA
CTGTCTGTCACCT---
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CTGCATGGCYCCAGAA-
TGTCGTGACCCCTTAAT
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.47
Offset:-7
Orientation:forward strand
Alignment:-------CTGCATGGCYCCAGAA
AATCGCACTGCATTCCG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CTGCATGGCYCCAGAA-
----ATGACATCATCNN
 A T G C C A G T A C T G A G T C G T C A A C G T C T A G C T A G G T A C G A C T G A T C A G T C C G T A C T A G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T