Information for 2-CTCWARAGAGTGGGTT (Motif 3)

G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C G T A C A T G C T C G A A G T C C G A T A G T C A G C T A G T C G A C T G C T A A T C G G T C A A C T G
p-value:1e-12
log p-value:-2.950e+01
Information Content per bp:1.733
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 19.5bp
Average Position of motif in Background55.0 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCWARAGAGTGGGTT---
---TGCGGAGTGGGACTGG
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CTCWARAGAGTGGGTT--
------NGCGTGGGCGGR
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CTCWARAGAGTGGGTT
------TGCGTGGGYG
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTCWARAGAGTGGGTT--
------NNTGTGGATTSS
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CTCWARAGAGTGGGTT----
---NNNATTGGGGGTNTCCT
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.47
Offset:6
Orientation:forward strand
Alignment:CTCWARAGAGTGGGTT------
------AGAGCGGGGTCAAGTA
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.47
Offset:9
Orientation:forward strand
Alignment:CTCWARAGAGTGGGTT
---------GTTTGTT
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:CTCWARAGAGTGGGTT---
--------TGTGGATTNNN
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.47
Offset:8
Orientation:forward strand
Alignment:CTCWARAGAGTGGGTT
--------TGTCGGTT
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:CTCWARAGAGTGGGTT--
----ANTGCGGGGGCGGN
 G T A C A C G T A T G C C G A T C T G A T C A G C T G A T A C G C G T A A C T G A C G T A T C G A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A